EnhancerDB
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  3. rs539588277[chr8:125641963]
Enhancers that have rs539588277[chr8:125641963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr8 125602445 125658555 enh10511
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr8 125641743 125642346 vista60448
VISTA
Transcript factors that have rs539588277[chr8:125641963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr8 125641837 125642271 RELA UCSC Txn Factor no Conserved 108548760
chr8 125641898 125642315 RUNX3 UCSC Txn Factor no Conserved 108548761
chr8 125641922 125642426 TCF7L2 UCSC Txn Factor no Conserved 108548762
chr8 125641951 125641970 RFX2 JASPAR yes 48123463
chr8 125641951 125641970 RFX2 JASPAR yes 68421784
chr8 125641955 125641965 NFATC3 JASPAR yes 48123464
chr8 125641955 125641965 NFATC3 JASPAR yes 68421785
chr8 125641955 125641971 RFX2 JASPAR yes 48123465
chr8 125641955 125641971 RFX3 JASPAR yes 48123466
chr8 125641955 125641971 RFX4 JASPAR yes 48123467
chr8 125641955 125641971 RFX5 JASPAR yes 48123468
chr8 125641955 125641971 RFX2 JASPAR yes 68421786
chr8 125641955 125641971 RFX3 JASPAR yes 68421787
chr8 125641955 125641971 RFX4 JASPAR yes 68421788
chr8 125641955 125641971 RFX5 JASPAR yes 68421789
chr8 125641955 125642355 FOS UCSC Txn Factor no Conserved 108548763
Genes associated with rs539588277[chr8:125641963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More