EnhancerDB
  1. Home
  2. SNP
  3. rs539592260[chr17:56415478]
Enhancers that have rs539592260[chr17:56415478]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56410845 56419415 enh4498
Liver (HepG2) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs539592260[chr17:56415478]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275032
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275033
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275034
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275035
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275036
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275037
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774005
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275067
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275068
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275069
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275070
chr17 56414521 56415733 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774039
chr17 56415036 56415717 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774051
chr17 56415051 56415487 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774053
chr17 56415143 56415796 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774056
chr17 56415196 56415610 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774058
chr17 56415221 56415597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774059
chr17 56415247 56416059 ZBTB7A UCSC Txn Factor no Conserved 108275126
chr17 56415247 56416059 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275127
chr17 56415250 56415576 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774061
chr17 56415259 56415695 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774063
chr17 56415267 56415597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774064
chr17 56415270 56415726 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774065
chr17 56415291 56415587 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774066
chr17 56415294 56415704 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774067
chr17 56415297 56415561 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774068
chr17 56415303 56415739 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774069
chr17 56415317 56415701 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774070
chr17 56415335 56415566 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774071
chr17 56415338 56415668 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774072
chr17 56415343 56415606 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774073
chr17 56415349 56415539 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774074
chr17 56415350 56415705 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774075
chr17 56415358 56415748 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21774076
chr17 56415371 56415751 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774077
chr17 56415375 56415559 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774078
chr17 56415380 56415597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774079
chr17 56415382 56415657 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774080
chr17 56415386 56415750 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774081
chr17 56415404 56415740 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21774082
chr17 56415405 56415625 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774083
chr17 56415416 56415651 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774084
chr17 56415418 56415590 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774085
chr17 56415430 56415744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774086
chr17 56415434 56415568 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774087
chr17 56415435 56415815 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774088
chr17 56415436 56415657 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774089
chr17 56415448 56415612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774090
chr17 56415453 56415569 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774091
chr17 56415463 56415552 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774092
chr17 56415467 56415687 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21774093
chr17 56415472 56415648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774094
chr17 56415475 56415489 PLAG1 JASPAR yes 55012993
Genes associated with rs539592260[chr17:56415478], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More