EnhancerDB
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  3. rs539601250[chr6:33580093]
Enhancers that have rs539601250[chr6:33580093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs539601250[chr6:33580093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33580072 33580093 REST JASPAR yes 101161122
chr6 33580089 33580110 REST JASPAR yes 101161123
Genes associated with rs539601250[chr6:33580093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More