EnhancerDB
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  3. rs539627596[chr7:80394883]
Enhancers that have rs539627596[chr7:80394883]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 80387637 80416755 enh40311
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Uterus Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs539627596[chr7:80394883]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 80394871 80394891 RREB1 JASPAR yes 15934331
chr7 80394871 80394892 IRF1 JASPAR yes 15934332
chr7 80394876 80394896 RREB1 JASPAR yes 15934333
chr7 80394877 80394898 IRF1 JASPAR yes 15934334
chr7 80394878 80394884 TCF4 TRANSFAC yes 15934335
chr7 80394878 80394893 FOXP1 JASPAR yes 15934336
chr7 80394881 80394893 IRF1 JASPAR yes 15934337
chr7 80394881 80394901 RREB1 JASPAR yes 15934338
chr7 80394882 80394903 IRF1 JASPAR yes 15934339
chr7 80394883 80394889 TCF4 TRANSFAC yes 15934340
chr7 80394883 80394898 FOXP1 JASPAR yes 15934341
Genes associated with rs539627596[chr7:80394883], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More