EnhancerDB
  1. Home
  2. SNP
  3. rs539628648[chr3:189901044]
Enhancers that have rs539628648[chr3:189901044]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189883257 189906215 enh36261
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs539628648[chr3:189901044]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189901036 189901047 CDX2 JASPAR yes 8629249
chr3 189901037 189901049 FOXC2 JASPAR yes 8629250
chr3 189901038 189901049 FOXC1 JASPAR yes 8629251
Genes associated with rs539628648[chr3:189901044], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More