EnhancerDB
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  3. rs539643528[chr19:11051079]
Enhancers that have rs539643528[chr19:11051079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs539643528[chr19:11051079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11050691 11051252 TCF7L2 GTRD no Colon (HCT116) 21849228
chr19 11050812 11051420 TCF7L2 GTRD no Colon (HCT116) 21849229
chr19 11050851 11051178 ZNF274 GTRD no Bone Marrow (K562) 21849230
chr19 11050892 11051174 ZNF274 GTRD no Bone Marrow (K562) 21849231
chr19 11051071 11051090 RFX2 JASPAR yes 112446741
chr19 11051073 11051088 RFX5 JASPAR yes 112446742
Genes associated with rs539643528[chr19:11051079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More