EnhancerDB
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Enhancers that have rs539644967[chr1:201506359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs539644967[chr1:201506359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856607
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856608
chr1 201504923 201508385 ZNF274 GTRD no Cervix (HeLa-S3) 21364520
chr1 201505038 201507486 ZNF274 GTRD no Cervix (HeLa-S3) 21364521
chr1 201505038 201507492 ZNF274 GTRD no Cervix (HeLa-S3) 21364522
chr1 201505073 201508220 ZNF274 GTRD no Cervix (HeLa-S3) 21364523
chr1 201505145 201507383 ZNF274 GTRD no Cervix (HeLa-S3) 21364524
chr1 201505224 201507532 ZNF274 GTRD no Cervix (HeLa-S3) 21364527
chr1 201505228 201509085 ZNF143 GTRD no Epithelial (MCF-7) 107856609
chr1 201505284 201508115 ZNF274 GTRD no Cervix (HeLa-S3) 21364529
chr1 201505417 201507553 ZNF274 GTRD no Cervix (HeLa-S3) 21364534
chr1 201506116 201507863 ERG GTRD no Prostate (RWPE1) 21364541
chr1 201506220 201506484 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364542
chr1 201506242 201507653 ZNF274 GTRD no Cervix (HeLa-S3) 21364543
chr1 201506259 201507557 ZNF274 GTRD no Cervix (HeLa-S3) 21364544
chr1 201506270 201507385 ZNF274 GTRD no Cervix (HeLa-S3) 21364545
chr1 201506296 201507735 TCF7L2 GTRD no Colon (HCT116) 21364546
chr1 201506319 201507801 ZNF274 GTRD no Cervix (HeLa-S3) 21364547
Genes associated with rs539644967[chr1:201506359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More