EnhancerDB
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  3. rs539678679[chr11:62238292]
Enhancers that have rs539678679[chr11:62238292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62190145 62243455 enh13972
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539678679[chr11:62238292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62238277 62238298 IRF1 JASPAR yes 39205394
chr11 62238281 62238296 STAT2 JASPAR yes 39205395
chr11 62238283 62238304 IRF1 JASPAR yes 39205396
chr11 62238285 62238300 IRF9 JASPAR yes 39205397
chr11 62238287 62238299 IRF1 JASPAR yes 39205398
chr11 62238287 62238301 STAT1 JASPAR yes 39205399
chr11 62238287 62238302 STAT2 JASPAR yes 39205400
chr11 62238288 62238300 IRF1 JASPAR yes 39205401
Genes associated with rs539678679[chr11:62238292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More