EnhancerDB
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  3. rs539721594[chr1:224688494]
Enhancers that have rs539721594[chr1:224688494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 224688435 224688713 vista5301
VISTA
Transcript factors that have rs539721594[chr1:224688494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224688149 224688553 ZNF143 GTRD no Epithelial (MCF-7) 107873815
chr1 224688228 224688557 ZNF274 GTRD no Liver (HepG2) 107873816
chr1 224688297 224688546 ZNF274 GTRD no Liver (HepG2) 107873817
chr1 224688485 224688495 SP1 JASPAR yes 35707498
chr1 224688485 224688495 SP1 JASPAR yes 118468444
chr1 224688494 224688505 NRL JASPAR yes 35707499
chr1 224688494 224688505 NRL JASPAR yes 118468445
chr1 224688494 224688509 MAFK JASPAR yes 35707500
chr1 224688494 224688509 MAFK JASPAR yes 118468446
Genes associated with rs539721594[chr1:224688494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More