EnhancerDB
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  3. rs539754866[chr17:65387457]
Enhancers that have rs539754866[chr17:65387457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65375805 65390455 enh32308
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs539754866[chr17:65387457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65386846 65387496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782085
chr17 65386846 65387496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285679
chr17 65386873 65387461 STAT3 UCSC Txn Factor no Conserved 108285696
chr17 65387005 65387475 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21782115
chr17 65387005 65387475 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285715
chr17 65387005 65387575 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21782116
chr17 65387005 65387575 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285716
chr17 65387117 65387461 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782118
chr17 65387117 65387461 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285718
chr17 65387134 65387630 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21782119
chr17 65387134 65387630 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285719
chr17 65387140 65387470 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782120
chr17 65387140 65387470 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285720
chr17 65387149 65387513 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782121
chr17 65387149 65387513 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285721
chr17 65387206 65387676 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21782122
chr17 65387206 65387676 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285722
chr17 65387447 65387457 SP1 JASPAR yes 55497354
Genes associated with rs539754866[chr17:65387457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More