EnhancerDB
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  3. rs539761527[chr16:14494171]
Enhancers that have rs539761527[chr16:14494171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14436207 14505799 enh3905
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs539761527[chr16:14494171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14493233 14499423 ZNF274 GTRD no Liver (HepG2) 21693183
chr16 14493422 14494366 ZNF274 GTRD no Liver (HepG2) 21693213
chr16 14493586 14494325 ZNF274 GTRD no Liver (HepG2) 21693235
chr16 14493618 14494226 ZNF274 GTRD no Liver (HepG2) 21693237
chr16 14493682 14494247 ZNF274 GTRD no Liver (HepG2) 21693239
chr16 14493753 14494225 ZNF274 GTRD no Liver (HepG2) 21693240
chr16 14493909 14494240 ZNF274 GTRD no Liver (HepG2) 21693242
chr16 14494159 14494175 GLIS1 JASPAR yes 9694376
chr16 14494160 14494174 GLIS2 JASPAR yes 9694377
chr16 14494160 14494174 GLIS3 JASPAR yes 9694378
chr16 14494167 14494181 PLAG1 JASPAR yes 9694379
chr16 14494171 14494176 GATA1 TRANSFAC yes 9694380
Genes associated with rs539761527[chr16:14494171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More