EnhancerDB
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  3. rs539773531[chr2:25321700]
Enhancers that have rs539773531[chr2:25321700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25319065 25324215 enh18352
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Placenta Thyroid Uterus Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs539773531[chr2:25321700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25321686 25321700 TLX1 JASPAR yes 72451539
chr2 25321694 25321715 IRF1 JASPAR yes 72451541
chr2 25321695 25321716 IRF1 JASPAR yes 72451542
chr2 25321696 25321700 H1TF2 TRANSFAC yes 72451543
chr2 25321696 25321700 NFE TRANSFAC yes 72451544
chr2 25321696 25321700 SRF TRANSFAC yes 72451545
chr2 25321697 25321718 IRF1 JASPAR yes 72451546
chr2 25321698 25321719 IRF1 JASPAR yes 72451547
chr2 25321699 25321714 FOXP1 JASPAR yes 72451548
chr2 25321699 25321720 IRF1 JASPAR yes 72451549
chr2 25321700 25321715 FOXP1 JASPAR yes 72451550
chr2 25321700 25321721 IRF1 JASPAR yes 72451551
Genes associated with rs539773531[chr2:25321700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More