EnhancerDB
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  3. rs539792654[chr12:50996965]
Enhancers that have rs539792654[chr12:50996965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs539792654[chr12:50996965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50996960 50996974 POU4F1 JASPAR yes 120851056
chr12 50996960 50996976 POU4F2 JASPAR yes 120851057
chr12 50996960 50996976 POU4F3 JASPAR yes 120851058
chr12 50996961 50996973 HNF1B JASPAR yes 120851059
chr12 50996965 50996969 YY1 TRANSFAC yes 120851060
Genes associated with rs539792654[chr12:50996965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More