EnhancerDB
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  3. rs539827693[chr1:21344845]
Enhancers that have rs539827693[chr1:21344845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21337448 21356675 enh106
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539827693[chr1:21344845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21344834 21344848 PLAG1 JASPAR yes 27267456
chr1 21344841 21344846 SP1 TRANSFAC yes 27267457
chr1 21344842 21344847 SP1 TRANSFAC yes 27267458
chr1 21344845 21344850 SP1 TRANSFAC yes 27267459
Genes associated with rs539827693[chr1:21344845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More