EnhancerDB
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  3. rs539839365[chr2:28936226]
Enhancers that have rs539839365[chr2:28936226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs539839365[chr2:28936226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28936210 28936228 MAFF JASPAR yes 72672586
chr2 28936211 28936226 MAFK JASPAR yes 72672587
chr2 28936215 28936226 NRL JASPAR yes 72672588
Genes associated with rs539839365[chr2:28936226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More