EnhancerDB
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  3. rs539839657[chr16:14504001]
Enhancers that have rs539839657[chr16:14504001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14436207 14505799 enh3905
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs539839657[chr16:14504001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14501320 14504108 ZNF274 GTRD no Blood (GM12878) 21693363
chr16 14501449 14504107 ZNF274 GTRD no Blood (GM12878) 21693388
chr16 14502670 14504171 AR GTRD no Prostate (PC-3) 21693425
chr16 14502981 14504150 ZNF274 GTRD no Blood (GM12878) 21693430
chr16 14503088 14504066 ZNF274 GTRD no Blood (GM12878) 21693440
chr16 14503999 14504014 JUND JASPAR yes 9695841
Genes associated with rs539839657[chr16:14504001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More