EnhancerDB
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  3. rs539896894[chr1:27063119]
Enhancers that have rs539896894[chr1:27063119]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27058625 27079175 enh167
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539896894[chr1:27063119]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27063116 27063131 FOXP1 JASPAR yes 27654280
chr1 27063117 27063132 FOXP1 JASPAR yes 27654281
chr1 27063118 27063133 FOXP1 JASPAR yes 27654282
chr1 27063118 27063139 IRF1 JASPAR yes 27654283
chr1 27063119 27063134 FOXP1 JASPAR yes 27654284
chr1 27063119 27063140 IRF1 JASPAR yes 27654285
Genes associated with rs539896894[chr1:27063119], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More