EnhancerDB
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  3. rs539897080[chr16:85640986]
Enhancers that have rs539897080[chr16:85640986]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85640485 85664563 enh16874
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Liver Stomach Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs539897080[chr16:85640986]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85630425 85644326 ZNF143 GTRD no Epithelial (MCF-7) 21730693
chr16 85634392 85642323 ZNF143 GTRD no Epithelial (MCF-7) 21730703
chr16 85637039 85641243 ZNF143 GTRD no Epithelial (MCF-7) 21730711
chr16 85637066 85644867 ZNF143 GTRD no Epithelial (MCF-7) 21730713
chr16 85637132 85643143 ZNF143 GTRD no Epithelial (MCF-7) 21730716
chr16 85637697 85642368 TCF7L2 GTRD no Colon (HCT116) 21730720
chr16 85638253 85645854 TCF7L2 GTRD no Colon (HCT116) 21730721
chr16 85639215 85641703 TCF7L2 GTRD no Colon (HCT116) 21730728
chr16 85639778 85641087 ZNF274 GTRD no Bone Marrow (K562) 21730731
chr16 85640573 85641004 ZNF274 GTRD no Bone Marrow (K562) 21730732
chr16 85640616 85641232 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21730733
chr16 85640847 85641367 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21730734
chr16 85640851 85641451 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21730735
chr16 85640871 85641215 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730736
chr16 85640882 85642287 ZNF143 GTRD no Epithelial (MCF-7) 21730737
chr16 85640891 85641255 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730738
chr16 85640935 85641325 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730739
chr16 85640949 85641299 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730740
chr16 85640950 85641226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730741
chr16 85640955 85641265 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730742
chr16 85640956 85641212 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730743
chr16 85640965 85641225 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730744
Genes associated with rs539897080[chr16:85640986], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More