EnhancerDB
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  3. rs539899106[chr3:56966923]
Enhancers that have rs539899106[chr3:56966923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs539899106[chr3:56966923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56966909 56966924 JUND JASPAR yes 2613292
chr3 56966910 56966923 JUN JASPAR yes 2613293
chr3 56966913 56966923 POU6F2 JASPAR yes 2613295
chr3 56966918 56966933 MEF2C JASPAR yes 2613297
Genes associated with rs539899106[chr3:56966923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More