EnhancerDB
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  3. rs539901497[chr1:205710130]
Enhancers that have rs539901497[chr1:205710130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205701495 205718195 enh897
Prostate (RWPE1) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 205709805 205710150 vista4761
VISTA
Transcript factors that have rs539901497[chr1:205710130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205708576 205710450 ZNF274 GTRD no Liver (HepG2) 107862462
chr1 205708751 205710288 ZNF274 GTRD no Liver (HepG2) 107862463
chr1 205708773 205711694 ZNF274 GTRD no Liver (HepG2) 107862464
chr1 205708779 205710287 ZNF274 GTRD no Liver (HepG2) 107862465
chr1 205708796 205712028 ZNF274 GTRD no Liver (HepG2) 107862466
chr1 205708838 205711648 ZNF274 GTRD no Liver (HepG2) 107862467
chr1 205709129 205710170 ZNF274 GTRD no Liver (HepG2) 107862469
chr1 205709379 205711582 ZNF274 GTRD no Liver (HepG2) 107862470
chr1 205709430 205710257 ZNF274 GTRD no Liver (HepG2) 107862471
chr1 205709453 205710193 ZNF274 GTRD no Liver (HepG2) 107862472
chr1 205709527 205710303 ZNF274 GTRD no Liver (HepG2) 107862476
chr1 205709606 205710155 ZNF274 GTRD no Liver (HepG2) 107862479
chr1 205709609 205710255 ZNF274 GTRD no Liver (HepG2) 107862480
chr1 205709709 205710235 ZNF274 GTRD no Liver (HepG2) 107862484
chr1 205709763 205712384 ZBTB33 GTRD no Lung (A549) 107862485
chr1 205709880 205711136 ZNF143 GTRD no Epithelial (MCF-7) 21372183
chr1 205709880 205711136 ZNF143 GTRD no Epithelial (MCF-7) 107862486
chr1 205710082 205710948 ZNF143 GTRD no Epithelial (MCF-7) 21372184
chr1 205710082 205710948 ZNF143 GTRD no Epithelial (MCF-7) 107862488
chr1 205710122 205710134 FOXC2 JASPAR yes 34782944
chr1 205710122 205710134 FOXC2 JASPAR yes 118442092
chr1 205710123 205710134 FOXC1 JASPAR yes 34782945
chr1 205710123 205710134 FOXC1 JASPAR yes 118442093
chr1 205710124 205710135 FOXA1 JASPAR yes 34782946
chr1 205710124 205710135 FOXA1 JASPAR yes 118442094
chr1 205710126 205711084 ZNF143 GTRD no Epithelial (MCF-7) 21372185
chr1 205710126 205711084 ZNF143 GTRD no Epithelial (MCF-7) 107862489
Genes associated with rs539901497[chr1:205710130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More