EnhancerDB
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  3. rs539906584[chr16:87492312]
Enhancers that have rs539906584[chr16:87492312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539906584[chr16:87492312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87490431 87492349 ZNF274 GTRD no Liver (HepG2) 21733347
chr16 87490431 87492349 ZNF274 GTRD no Liver (HepG2) 108219285
chr16 87490586 87492343 ZNF274 GTRD no Liver (HepG2) 21733355
chr16 87490586 87492343 ZNF274 GTRD no Liver (HepG2) 108219293
chr16 87490623 87492345 ZNF274 GTRD no Liver (HepG2) 21733357
chr16 87490623 87492345 ZNF274 GTRD no Liver (HepG2) 108219295
chr16 87492301 87492313 HINFP JASPAR yes 12217748
chr16 87492307 87492327 RREB1 JASPAR yes 12217749
chr16 87492308 87492328 RREB1 JASPAR yes 12217750
Genes associated with rs539906584[chr16:87492312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More