EnhancerDB
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  3. rs539907423[chr6:15351308]
Enhancers that have rs539907423[chr6:15351308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 15346937 15373294 enh23066
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Lung (A549) Blood (GM12878) Placenta Pancreas Neural Stem Cells (H9) Stomach
Transcript factors that have rs539907423[chr6:15351308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 15351300 15351311 CDX2 JASPAR yes 100208339
chr6 15351301 15351312 HOXA10 JASPAR yes 100208340
chr6 15351302 15351311 CDX1 JASPAR yes 100208341
chr6 15351302 15351312 HOXA13 JASPAR yes 100208342
chr6 15351302 15351312 HOXB13 JASPAR yes 100208343
chr6 15351302 15351312 HOXC10 JASPAR yes 100208344
chr6 15351302 15351312 HOXD13 JASPAR yes 100208345
chr6 15351307 15351320 POU3F3 JASPAR yes 100208346
chr6 15351307 15351322 HNF4G JASPAR yes 100208347
Genes associated with rs539907423[chr6:15351308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More