EnhancerDB
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  3. rs539910725[chr1:45187208]
Enhancers that have rs539910725[chr1:45187208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45170697 45189455 enh312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs539910725[chr1:45187208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45187200 45187208 FOXG1 JASPAR yes 28577266
chr1 45187203 45187213 BARHL2 JASPAR yes 28577267
chr1 45187205 45187209 YY1 TRANSFAC yes 28577268
Genes associated with rs539910725[chr1:45187208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More