EnhancerDB
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  3. rs539912288[chr1:154704742]
Enhancers that have rs539912288[chr1:154704742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154698465 154705255 enh27141
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung (A549) Blood (GM12878) Muscle (A673) Stomach Uterus Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs539912288[chr1:154704742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154704734 154704748 TLX1 JASPAR yes 32305629
chr1 154704737 154704747 TFEB JASPAR yes 32305630
chr1 154704737 154704747 TFEC JASPAR yes 32305631
chr1 154704737 154704748 USF1 JASPAR yes 32305632
chr1 154704737 154704748 USF2 JASPAR yes 32305633
chr1 154704738 154704748 MAX JASPAR yes 32305634
chr1 154704742 154704750 MEIS3 JASPAR yes 32305635
Genes associated with rs539912288[chr1:154704742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More