EnhancerDB
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  3. rs539912824[chr1:203644326]
Enhancers that have rs539912824[chr1:203644326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203628785 203657695 enh12563
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539912824[chr1:203644326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203642827 203644353 P63 GTRD no Skin (Keratinocyte) 21369754
chr1 203642827 203644353 P63 GTRD no Skin (Keratinocyte) 107859249
chr1 203643037 203644364 P63 GTRD no Skin (Keratinocyte) 21369770
chr1 203643037 203644364 P63 GTRD no Skin (Keratinocyte) 107859265
chr1 203644321 203644331 FIGLA JASPAR yes 34654450
chr1 203644321 203644332 USF1 JASPAR yes 34654451
chr1 203644321 203644332 USF2 JASPAR yes 34654452
Genes associated with rs539912824[chr1:203644326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More