EnhancerDB
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  3. rs539920878[chr2:235363360]
Enhancers that have rs539920878[chr2:235363360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235350952 235364170 enh19343
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs539920878[chr2:235363360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235363351 235363366 FOXP1 JASPAR yes 81880164
chr2 235363351 235363372 IRF1 JASPAR yes 81880165
chr2 235363352 235363367 FOXP1 JASPAR yes 81880166
chr2 235363352 235363373 IRF1 JASPAR yes 81880167
chr2 235363353 235363368 FOXP1 JASPAR yes 81880168
chr2 235363353 235363374 IRF1 JASPAR yes 81880169
chr2 235363354 235363369 FOXP1 JASPAR yes 81880170
chr2 235363355 235363370 FOXP1 JASPAR yes 81880171
chr2 235363356 235363371 FOXP1 JASPAR yes 81880172
chr2 235363356 235363377 IRF1 JASPAR yes 81880173
chr2 235363357 235363372 FOXP1 JASPAR yes 81880174
chr2 235363360 235363375 STAT2 JASPAR yes 81880175
Genes associated with rs539920878[chr2:235363360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More