EnhancerDB
  1. Home
  2. SNP
  3. rs539930200[chr1:52101808]
Enhancers that have rs539930200[chr1:52101808]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539930200[chr1:52101808]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52101792 52101813 ZNF263 JASPAR yes 28857206
chr1 52101793 52101814 ZNF263 JASPAR yes 28857207
chr1 52101796 52101817 ZNF263 JASPAR yes 28857208
chr1 52101798 52101819 ZNF263 JASPAR yes 28857210
chr1 52101800 52101821 ZNF263 JASPAR yes 28857212
chr1 52101801 52101809 EHF JASPAR yes 28857213
chr1 52101801 52101822 IRF1 JASPAR yes 28857214
chr1 52101802 52101823 ZNF263 JASPAR yes 28857215
chr1 52101803 52101808 ETS2 TRANSFAC yes 28857216
chr1 52101805 52101813 EHF JASPAR yes 28857217
chr1 52101807 52101814 SPIB JASPAR yes 28857218
chr1 52101807 52101822 PRDM1 JASPAR yes 28857219
Genes associated with rs539930200[chr1:52101808], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More