EnhancerDB
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  3. rs539933099[chr18:56456472]
Enhancers that have rs539933099[chr18:56456472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56442885 56463415 enh17747
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Stomach Muscle (A673) Placenta Pancreas (Panc1) Lung (PC-9) Breast Spleen Uterus Heart
Transcript factors that have rs539933099[chr18:56456472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56456350 56456820 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21824377
chr18 56456396 56456969 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21824378
Genes associated with rs539933099[chr18:56456472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More