EnhancerDB
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  3. rs539958829[chr19:2599797]
Enhancers that have rs539958829[chr19:2599797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2585524 2605695 enh17851
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs539958829[chr19:2599797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2598526 2600417 ZNF274 GTRD no Blood (GM12878) 21837510
chr19 2598526 2600417 ZNF274 GTRD no Blood (GM12878) 108362963
chr19 2598533 2600047 ZNF274 GTRD no Blood (GM12878) 21837511
chr19 2598533 2600047 ZNF274 GTRD no Blood (GM12878) 108362964
chr19 2598535 2599959 ZNF274 GTRD no Blood (GM12878) 21837512
chr19 2598535 2599959 ZNF274 GTRD no Blood (GM12878) 108362965
chr19 2598538 2599980 ZNF274 GTRD no Blood (GM12878) 21837513
chr19 2598538 2599980 ZNF274 GTRD no Blood (GM12878) 108362966
chr19 2598546 2600002 ZNF274 GTRD no Blood (GM12878) 21837514
chr19 2598546 2600002 ZNF274 GTRD no Blood (GM12878) 108362967
chr19 2598555 2600180 ZNF274 GTRD no Blood (GM12878) 21837515
chr19 2598555 2600180 ZNF274 GTRD no Blood (GM12878) 108362968
chr19 2598560 2599915 ZNF274 GTRD no Blood (GM12878) 21837516
chr19 2598560 2599915 ZNF274 GTRD no Blood (GM12878) 108362969
chr19 2598561 2599917 ZNF274 GTRD no Blood (GM12878) 21837517
chr19 2598561 2599917 ZNF274 GTRD no Blood (GM12878) 108362970
chr19 2598576 2599914 ZNF274 GTRD no Blood (GM12878) 21837518
chr19 2598576 2599914 ZNF274 GTRD no Blood (GM12878) 108362971
chr19 2598610 2599947 ZBTB33 GTRD no Lung (A549) 108362972
chr19 2598618 2600012 ZNF274 GTRD no Blood (GM12878) 21837519
chr19 2598618 2600012 ZNF274 GTRD no Blood (GM12878) 108362973
chr19 2598652 2600000 ZNF274 GTRD no Blood (GM12878) 21837521
chr19 2598652 2600000 ZNF274 GTRD no Blood (GM12878) 108362975
chr19 2598652 2600564 ZNF274 GTRD no Blood (GM12878) 21837522
chr19 2598652 2600564 ZNF274 GTRD no Blood (GM12878) 108362976
chr19 2598659 2599882 ZNF274 GTRD no Bone Marrow (K562) 108362977
chr19 2598663 2599826 ZNF274 GTRD no Blood (GM12878) 21837524
chr19 2598663 2599826 ZNF274 GTRD no Blood (GM12878) 108362979
chr19 2598664 2599926 TCF7L2 GTRD no Colon (HCT116) 108362980
chr19 2598666 2599901 ZNF274 GTRD no Blood (GM12878) 21837525
chr19 2598666 2599901 ZNF274 GTRD no Blood (GM12878) 108362981
chr19 2598666 2599907 TCF7L2 GTRD no Colon (HCT116) 108362982
chr19 2598669 2600006 TCF7L2 GTRD no Colon (HCT116) 108362984
chr19 2598674 2599933 ZNF274 GTRD no Blood (GM12878) 21837527
chr19 2598674 2599933 ZNF274 GTRD no Blood (GM12878) 108362986
chr19 2598688 2599949 ZNF274 GTRD no Liver (HepG2) 21837528
chr19 2598688 2599949 ZNF274 GTRD no Liver (HepG2) 108362987
chr19 2598699 2599818 ZNF274 GTRD no Liver (HepG2) 21837529
chr19 2598699 2599818 ZNF274 GTRD no Liver (HepG2) 108362991
chr19 2598711 2599913 ZNF274 GTRD no Blood (GM12878) 21837530
chr19 2598711 2599913 ZNF274 GTRD no Blood (GM12878) 108362994
chr19 2598712 2599866 ZNF143 GTRD no Epithelial (MCF-7) 108362995
chr19 2598714 2599829 ZNF274 GTRD no Blood (GM12878) 21837531
chr19 2598714 2599829 ZNF274 GTRD no Blood (GM12878) 108362997
chr19 2598715 2599890 ZNF274 GTRD no Blood (GM12878) 21837532
chr19 2598715 2599890 ZNF274 GTRD no Blood (GM12878) 108362998
chr19 2598715 2599934 ZNF274 GTRD no Blood (GM12878) 21837533
chr19 2598715 2599934 ZNF274 GTRD no Blood (GM12878) 108362999
chr19 2598717 2599913 ZNF274 GTRD no Blood (GM12878) 21837536
chr19 2598717 2599913 ZNF274 GTRD no Blood (GM12878) 108363002
chr19 2598717 2599925 ZNF274 GTRD no Blood (GM12878) 21837537
chr19 2598717 2599925 ZNF274 GTRD no Blood (GM12878) 108363003
chr19 2598718 2599840 ZNF274 GTRD no Blood (GM12878) 21837539
chr19 2598718 2599840 ZNF274 GTRD no Blood (GM12878) 108363006
chr19 2598718 2599849 ZNF274 GTRD no Blood (GM12878) 21837540
chr19 2598718 2599849 ZNF274 GTRD no Blood (GM12878) 108363007
chr19 2598720 2599882 ZNF274 GTRD no Blood (GM12878) 21837541
chr19 2598720 2599882 ZNF274 GTRD no Blood (GM12878) 108363009
chr19 2598721 2599814 ZNF274 GTRD no Blood (GM12878) 21837542
chr19 2598721 2599814 ZNF274 GTRD no Blood (GM12878) 108363010
chr19 2598724 2599837 ZNF274 GTRD no Blood (GM12878) 21837544
chr19 2598724 2599837 ZNF274 GTRD no Blood (GM12878) 108363013
chr19 2598729 2600089 TCF7L2 GTRD no Colon (HCT116) 108363014
chr19 2598731 2599821 ZNF274 GTRD no Blood (GM12878) 21837546
chr19 2598731 2599821 ZNF274 GTRD no Blood (GM12878) 108363016
chr19 2598731 2599844 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21837547
chr19 2598731 2599844 POLR2A UCSC Txn Factor no Conserved 108363017
chr19 2598731 2599844 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108363018
chr19 2598732 2599830 ZNF274 GTRD no Liver (HepG2) 21837548
chr19 2598732 2599830 ZNF274 GTRD no Liver (HepG2) 108363019
chr19 2598734 2599911 ZNF274 GTRD no Liver (HepG2) 21837549
chr19 2598734 2599911 ZNF274 GTRD no Liver (HepG2) 108363020
chr19 2598742 2600033 ZNF274 GTRD no Blood (GM12878) 21837550
chr19 2598742 2600033 ZNF274 GTRD no Blood (GM12878) 108363022
chr19 2598745 2599967 ZNF274 GTRD no Liver (HepG2) 21837551
chr19 2598745 2599967 ZNF274 GTRD no Liver (HepG2) 108363024
chr19 2598747 2599814 ZNF274 GTRD no Blood (GM12878) 21837552
chr19 2598747 2599814 ZNF274 GTRD no Blood (GM12878) 108363025
chr19 2598750 2599944 ZBTB33 GTRD no Lung (A549) 108363027
chr19 2598752 2599907 ZNF274 GTRD no Blood (GM12878) 21837554
chr19 2598752 2599907 ZNF274 GTRD no Blood (GM12878) 108363029
chr19 2598753 2599969 ZNF274 GTRD no Blood (GM12878) 21837555
chr19 2598753 2599969 ZNF274 GTRD no Blood (GM12878) 108363030
chr19 2598762 2599913 ZNF274 GTRD no Blood (GM12878) 21837556
chr19 2598762 2599913 ZNF274 GTRD no Blood (GM12878) 108363033
chr19 2598772 2599886 ZBTB33 GTRD no Lung (A549) 108363036
chr19 2598775 2599812 ZNF274 GTRD no Blood (GM12878) 21837558
chr19 2598775 2599812 ZNF274 GTRD no Blood (GM12878) 108363037
chr19 2598784 2599882 ZNF274 GTRD no Liver (HepG2) 21837561
chr19 2598784 2599882 ZNF274 GTRD no Liver (HepG2) 108363041
chr19 2598786 2599926 ZNF274 GTRD no Blood (GM12878) 21837562
chr19 2598786 2599926 ZNF274 GTRD no Blood (GM12878) 108363042
chr19 2598787 2599834 ZBTB33 GTRD no Lung (A549) 108363043
chr19 2598792 2599892 ZNF274 GTRD no Blood (GM12878) 21837563
chr19 2598792 2599892 ZNF274 GTRD no Blood (GM12878) 108363045
chr19 2598795 2599832 ZNF274 GTRD no Liver (HepG2) 21837565
chr19 2598795 2599832 ZNF274 GTRD no Liver (HepG2) 108363048
chr19 2598796 2599979 ZNF274 GTRD no Liver (HepG2) 21837566
chr19 2598796 2599979 ZNF274 GTRD no Liver (HepG2) 108363049
chr19 2598805 2600014 ZNF274 GTRD no Blood (GM12878) 21837569
chr19 2598805 2600014 ZNF274 GTRD no Blood (GM12878) 108363052
chr19 2598806 2599955 ZNF274 GTRD no Liver (HepG2) 21837571
chr19 2598806 2599955 ZNF274 GTRD no Liver (HepG2) 108363054
chr19 2598816 2599842 ZNF274 GTRD no Liver (HepG2) 21837573
chr19 2598816 2599842 ZNF274 GTRD no Liver (HepG2) 108363060
chr19 2598818 2599813 ZNF274 GTRD no Blood (GM12878) 21837574
chr19 2598818 2599813 ZNF274 GTRD no Blood (GM12878) 108363061
chr19 2598821 2599832 ZNF274 GTRD no Bone Marrow (K562) 108363063
chr19 2598825 2599967 TCF7L2 GTRD no Colon (HCT116) 108363066
chr19 2598826 2599847 ZNF274 GTRD no Blood (GM12878) 21837576
chr19 2598826 2599847 ZNF274 GTRD no Blood (GM12878) 108363068
chr19 2598827 2599823 ZNF274 GTRD no Liver (HepG2) 21837578
chr19 2598827 2599823 ZNF274 GTRD no Liver (HepG2) 108363070
chr19 2598840 2599843 ZNF274 GTRD no Blood (GM12878) 21837582
chr19 2598840 2599843 ZNF274 GTRD no Blood (GM12878) 108363076
chr19 2598844 2600036 TCF7L2 GTRD no Colon (HCT116) 108363078
chr19 2598850 2600112 TCF7L2 GTRD no Colon (HCT116) 108363082
chr19 2598859 2599919 ZNF274 GTRD no Liver (HepG2) 21837589
chr19 2598859 2599919 ZNF274 GTRD no Liver (HepG2) 108363086
chr19 2598862 2600046 TCF7L2 GTRD no Colon (HCT116) 108363088
chr19 2598878 2600125 TCF7L2 GTRD no Colon (HCT116) 108363094
chr19 2598909 2600161 TCF7L2 GTRD no Colon (HCT116) 108363112
chr19 2598936 2599799 ZNF274 GTRD no Liver (HepG2) 21837607
chr19 2598936 2599799 ZNF274 GTRD no Liver (HepG2) 108363124
chr19 2598965 2599912 TCF7L2 GTRD no Colon (HCT116) 108363138
chr19 2599048 2599799 TCF7L2 GTRD no Colon (HCT116) 108363177
chr19 2599068 2599876 ZNF143 GTRD no Epithelial (MCF-7) 108363188
chr19 2599121 2599915 TCF7L2 GTRD no Colon (HCT116) 108363195
chr19 2599168 2600039 TCF7L2 GTRD no Colon (HCT116) 108363200
chr19 2599211 2599811 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108363201
chr19 2599234 2600082 TCF7L2 GTRD no Colon (HCT116) 108363203
chr19 2599308 2599827 ZNF274 GTRD no Blood (GM12878) 21837643
chr19 2599308 2599827 ZNF274 GTRD no Blood (GM12878) 108363206
chr19 2599434 2599810 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108363216
chr19 2599786 2599801 ZIC3 JASPAR yes 112080706
Genes associated with rs539958829[chr19:2599797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More