EnhancerDB
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  3. rs539965953[chr12:54835050]
Enhancers that have rs539965953[chr12:54835050]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54815065 54835675 enh14748
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs539965953[chr12:54835050]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54835045 54835050 SP1 TRANSFAC yes 121042998
chr12 54835046 54835051 SP1 TRANSFAC yes 121042999
chr12 54835050 54835067 RXRA JASPAR yes 121043000
Genes associated with rs539965953[chr12:54835050], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More