EnhancerDB
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  3. rs539975337[chr1:205289262]
Enhancers that have rs539975337[chr1:205289262]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs539975337[chr1:205289262]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205288624 205289275 TCF7L2 UCSC Txn Factor no Conserved 107862022
chr1 205288679 205289275 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107862029
chr1 205289257 205289265 GMEB2 JASPAR yes 34754802
Genes associated with rs539975337[chr1:205289262], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More