EnhancerDB
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  3. rs539986191[chr1:205289550]
Enhancers that have rs539986191[chr1:205289550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs539986191[chr1:205289550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205289544 205289554 SP1 JASPAR yes 34754850
chr1 205289544 205289563 PAX5 JASPAR yes 34754851
chr1 205289547 205289552 SP1 TRANSFAC yes 34754852
Genes associated with rs539986191[chr1:205289550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More