EnhancerDB
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Enhancers that have rs540016503[chr17:73421594]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73418765 73428832 enh17376
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs540016503[chr17:73421594]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73420608 73421779 ZNF143 GTRD no Epithelial (MCF-7) 21787896
chr17 73420693 73421669 ZNF143 GTRD no Epithelial (MCF-7) 21787899
chr17 73420701 73421869 ZNF143 GTRD no Epithelial (MCF-7) 21787900
chr17 73420727 73421686 ZNF143 GTRD no Epithelial (MCF-7) 21787903
chr17 73420754 73421669 ZNF143 GTRD no Epithelial (MCF-7) 21787907
chr17 73420864 73421739 ZNF143 GTRD no Epithelial (MCF-7) 21787915
chr17 73420883 73421648 ZNF143 GTRD no Epithelial (MCF-7) 21787919
chr17 73420898 73421885 ZNF143 GTRD no Epithelial (MCF-7) 21787920
chr17 73420908 73421812 ZNF143 GTRD no Epithelial (MCF-7) 21787923
chr17 73420936 73421799 ZNF143 GTRD no Epithelial (MCF-7) 21787926
chr17 73421593 73421597 LFA1 TRANSFAC yes 55955844
Genes associated with rs540016503[chr17:73421594], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More