EnhancerDB
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  3. rs540023065[chr19:2572595]
Enhancers that have rs540023065[chr19:2572595]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs540023065[chr19:2572595]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2572589 2572610 IRF1 JASPAR yes 112076755
chr19 2572591 2572612 IRF1 JASPAR yes 112076756
chr19 2572593 2572608 FOXP1 JASPAR yes 112076757
chr19 2572594 2572609 FOXP1 JASPAR yes 112076758
chr19 2572595 2572610 FOXP1 JASPAR yes 112076759
Genes associated with rs540023065[chr19:2572595], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More