EnhancerDB
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  3. rs540026213[chr16:89551230]
Enhancers that have rs540026213[chr16:89551230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540026213[chr16:89551230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89551219 89551230 FOXA1 JASPAR yes 12349813
chr16 89551220 89551232 FOXC2 JASPAR yes 12349814
chr16 89551228 89551232 YY1 TRANSFAC yes 12349815
Genes associated with rs540026213[chr16:89551230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More