EnhancerDB
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  3. rs540046909[chr1:19260081]
Enhancers that have rs540046909[chr1:19260081]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540046909[chr1:19260081]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19260071 19260083 YY1 JASPAR yes 27162756
chr1 19260073 19260084 YY2 JASPAR yes 27162757
chr1 19260074 19260086 HLF JASPAR yes 27162758
Genes associated with rs540046909[chr1:19260081], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More