EnhancerDB
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  3. rs540084244[chr1:235001888]
Enhancers that have rs540084244[chr1:235001888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540084244[chr1:235001888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235001658 235001923 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399166
chr1 235001729 235002085 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399167
chr1 235001802 235002226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399168
chr1 235001871 235002191 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399169
chr1 235001881 235002131 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399170
chr1 235001882 235001901 PAX5 JASPAR yes 36322865
chr1 235001888 235002461 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399171
Genes associated with rs540084244[chr1:235001888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More