EnhancerDB
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  3. rs540089659[chr17:25644271]
Enhancers that have rs540089659[chr17:25644271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25643385 25655379 enh17060
Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Lung Stomach Placenta Thyroid Uterus Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs540089659[chr17:25644271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25644265 25644276 USF1 JASPAR yes 53618244
chr17 25644265 25644276 USF2 JASPAR yes 53618245
chr17 25644266 25644276 SREBF2 JASPAR yes 53618246
chr17 25644268 25644273 USF2 TRANSFAC yes 53618247
chr17 25644271 25644284 NR2F1 JASPAR yes 53618248
Genes associated with rs540089659[chr17:25644271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More