EnhancerDB
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  3. rs540090469[chr16:11422624]
Enhancers that have rs540090469[chr16:11422624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11415474 11429815 enh3885
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Kidney Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Muscle (A673)
chr16 11422424 11422652 vista21864
VISTA
Transcript factors that have rs540090469[chr16:11422624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11421005 11422786 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690600
chr16 11421005 11422786 POLR2A UCSC Txn Factor no Conserved 108181530
chr16 11421005 11422786 POLR2A UCSC Txn Factor no Conserved 108181531
chr16 11421005 11422786 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181532
chr16 11421005 11422786 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181533
chr16 11422144 11422794 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181559
chr16 11422150 11422650 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690625
chr16 11422150 11422650 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181560
chr16 11422225 11422755 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181561
chr16 11422225 11422881 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108181562
chr16 11422230 11422746 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181563
chr16 11422279 11422659 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690626
chr16 11422279 11422659 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181564
chr16 11422293 11422813 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181565
chr16 11422298 11422878 ATF2 UCSC Txn Factor no Conserved 108181566
chr16 11422298 11422878 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181567
chr16 11422302 11422838 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690627
chr16 11422302 11422838 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181568
chr16 11422305 11422669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690628
chr16 11422305 11422669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181569
chr16 11422314 11422810 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21690629
chr16 11422314 11422810 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108181570
chr16 11422314 11422822 TCF7L2 UCSC Txn Factor no Conserved 108181571
chr16 11422318 11422822 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181572
chr16 11422337 11422677 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690630
chr16 11422337 11422677 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181573
chr16 11422352 11423123 ZNF274 GTRD no Blood (GM12878) 21690631
chr16 11422352 11423123 ZNF274 GTRD no Blood (GM12878) 108181574
chr16 11422352 11423123 ZNF274 GTRD no Blood (GM12878) 108181575
chr16 11422357 11422681 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181576
chr16 11422368 11422660 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690632
chr16 11422368 11422660 POU2F2 UCSC Txn Factor no Conserved 108181577
chr16 11422368 11422660 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181578
chr16 11422369 11422745 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181579
chr16 11422370 11422780 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690633
chr16 11422370 11422780 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181580
chr16 11422371 11422701 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690634
chr16 11422371 11422701 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181581
chr16 11422374 11422698 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181582
chr16 11422378 11422734 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108181583
chr16 11422387 11422823 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690635
chr16 11422387 11422823 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181584
chr16 11422387 11422932 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690636
chr16 11422387 11422932 NFIC UCSC Txn Factor no Conserved 108181585
chr16 11422387 11422932 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181586
chr16 11422399 11422779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690638
chr16 11422399 11422779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181588
chr16 11422399 11423174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690639
chr16 11422399 11423174 RUNX3 UCSC Txn Factor no Conserved 108181589
chr16 11422399 11423174 RUNX3 UCSC Txn Factor no Conserved 108181590
chr16 11422399 11423174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181591
chr16 11422399 11423174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181592
chr16 11422404 11422804 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690640
chr16 11422404 11422804 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181593
chr16 11422405 11422789 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690641
chr16 11422405 11422789 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181594
chr16 11422410 11422729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690642
chr16 11422410 11422729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181595
chr16 11422410 11422730 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181596
chr16 11422410 11422758 TCF12 UCSC Txn Factor no Conserved 108181597
chr16 11422418 11422688 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690643
chr16 11422418 11422688 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181598
chr16 11422419 11422865 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690644
chr16 11422419 11422865 FOXM1 UCSC Txn Factor no Conserved 108181599
chr16 11422419 11422865 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181600
chr16 11422420 11422758 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108181601
chr16 11422420 11422824 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690645
chr16 11422420 11422824 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181602
chr16 11422423 11422673 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181603
chr16 11422423 11422743 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181604
chr16 11422423 11422747 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181605
chr16 11422424 11422704 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108181606
chr16 11422424 11422878 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690646
chr16 11422424 11422878 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181607
chr16 11422426 11422782 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690647
chr16 11422426 11422782 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181608
chr16 11422434 11422694 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181609
chr16 11422436 11422716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690648
chr16 11422436 11422716 TCF3 UCSC Txn Factor no Conserved 108181610
chr16 11422436 11422716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181611
chr16 11422440 11422696 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108181612
chr16 11422444 11422754 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690649
chr16 11422444 11422754 PAX5 UCSC Txn Factor no Conserved 108181613
chr16 11422444 11422754 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181614
chr16 11422447 11422725 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21690650
chr16 11422447 11422725 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108181615
chr16 11422452 11422696 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181616
chr16 11422461 11422729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690651
chr16 11422461 11422729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181617
chr16 11422465 11422752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690652
chr16 11422465 11422752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181618
chr16 11422466 11422653 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108181619
chr16 11422466 11422774 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690653
chr16 11422466 11422774 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181620
chr16 11422467 11422707 SPI1 UCSC Txn Factor no Conserved 108181621
chr16 11422467 11422747 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690654
chr16 11422467 11422747 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181622
chr16 11422468 11422688 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690655
chr16 11422468 11422688 BATF UCSC Txn Factor no Conserved 108181623
chr16 11422468 11422688 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181624
chr16 11422472 11422744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690656
chr16 11422472 11422744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181625
chr16 11422478 11422711 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108181626
chr16 11422479 11422743 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181627
chr16 11422479 11422756 CEBPB UCSC Txn Factor no Conserved 108181628
chr16 11422487 11422711 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690657
chr16 11422487 11422711 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181629
chr16 11422487 11422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690658
chr16 11422487 11422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181630
chr16 11422490 11422666 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108181631
chr16 11422491 11422755 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181632
chr16 11422498 11422678 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690659
chr16 11422498 11422678 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181633
chr16 11422500 11422730 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181634
chr16 11422500 11422756 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108181635
chr16 11422504 11422694 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690660
chr16 11422504 11422694 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181636
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 21690661
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 108181637
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 108181638
chr16 11422511 11422702 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690662
chr16 11422511 11422702 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181639
chr16 11422521 11422678 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690663
chr16 11422521 11422678 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181640
chr16 11422525 11422649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690664
chr16 11422525 11422649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181642
chr16 11422538 11422697 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690665
chr16 11422538 11422697 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181643
chr16 11422538 11423154 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181644
chr16 11422538 11423154 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181645
chr16 11422543 11423133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690666
chr16 11422543 11423133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181646
chr16 11422543 11423133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181647
chr16 11422570 11422681 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690667
chr16 11422570 11422681 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181648
chr16 11422615 11422626 CEBPA JASPAR yes 9506160
chr16 11422615 11422626 CEBPA JASPAR yes 49341437
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 21690668
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 108181649
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 108181650
Genes associated with rs540090469[chr16:11422624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More