EnhancerDB
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  3. rs540123750[chr4:86408807]
Enhancers that have rs540123750[chr4:86408807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 86405985 86423917 enh8051
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs540123750[chr4:86408807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 86408799 86408810 HOXA10 JASPAR yes 90999253
chr4 86408800 86408809 CDX1 JASPAR yes 90999254
chr4 86408800 86408811 CDX2 JASPAR yes 90999255
chr4 86408802 86408813 NFIL3 JASPAR yes 90999256
chr4 86408803 86408815 HLF JASPAR yes 90999257
Genes associated with rs540123750[chr4:86408807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More