EnhancerDB
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  3. rs540126075[chr16:89374687]
Enhancers that have rs540126075[chr16:89374687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540126075[chr16:89374687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89374676 89374691 FOXP1 JASPAR yes 12329177
chr16 89374678 89374689 FOXC1 JASPAR yes 12329178
chr16 89374678 89374690 FOXC2 JASPAR yes 12329179
chr16 89374680 89374695 FOXP1 JASPAR yes 12329180
chr16 89374685 89374700 FOXP1 JASPAR yes 12329181
chr16 89374685 89374706 IRF1 JASPAR yes 12329182
Genes associated with rs540126075[chr16:89374687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More