EnhancerDB
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  3. rs540130850[chr6:36583385]
Enhancers that have rs540130850[chr6:36583385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36569515 36588579 enh23193
Liver Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540130850[chr6:36583385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36583383 36583393 NKX2-3 JASPAR yes 101349518
chr6 36583384 36583392 ISL2 JASPAR yes 101349519
chr6 36583384 36583393 NKX3-2 JASPAR yes 101349520
Genes associated with rs540130850[chr6:36583385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More