EnhancerDB
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  3. rs540152874[chr12:46867157]
Enhancers that have rs540152874[chr12:46867157]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540152874[chr12:46867157]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46867104 46867368 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541846
chr12 46867154 46867169 FOXA1 JASPAR yes 120625990
chr12 46867155 46867167 FOXI1 JASPAR yes 120625991
chr12 46867156 46867168 FOXC2 JASPAR yes 120625992
chr12 46867156 46867170 ONECUT2 JASPAR yes 120625993
chr12 46867156 46867170 ONECUT3 JASPAR yes 120625994
chr12 46867157 46867168 FOXB1 JASPAR yes 120625995
chr12 46867157 46867168 FOXC1 JASPAR yes 120625996
Genes associated with rs540152874[chr12:46867157], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More