EnhancerDB
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  3. rs540160879[chr1:10312445]
Enhancers that have rs540160879[chr1:10312445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10309865 10316283 enh26531
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Peripheral Blood (MM.1S) Adrenal Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs540160879[chr1:10312445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10312433 10312453 RREB1 JASPAR yes 26710008
chr1 10312435 10312455 RREB1 JASPAR yes 26710009
chr1 10312438 10312458 RREB1 JASPAR yes 26710010
chr1 10312441 10312461 RREB1 JASPAR yes 26710011
chr1 10312442 10312448 TCF4 TRANSFAC yes 26710012
chr1 10312444 10312464 RREB1 JASPAR yes 26710013
Genes associated with rs540160879[chr1:10312445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More