EnhancerDB
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  3. rs540173054[chr16:87498047]
Enhancers that have rs540173054[chr16:87498047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540173054[chr16:87498047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87495790 87499579 ZNF274 GTRD no Liver (HepG2) 21733364
chr16 87495790 87499579 ZNF274 GTRD no Liver (HepG2) 108219302
chr16 87496236 87499325 ZNF274 GTRD no Liver (HepG2) 21733365
chr16 87496236 87499325 ZNF274 GTRD no Liver (HepG2) 108219303
chr16 87498039 87498048 ELK4 JASPAR yes 12218631
chr16 87498045 87498049 H4TF2 TRANSFAC yes 12218632
Genes associated with rs540173054[chr16:87498047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More