EnhancerDB
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Enhancers that have rs540213245[chr17:47817813]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47810345 47836435 enh17206
Bone Marrow (K562) Liver (HepG2) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Pancreas Uterus Thymus Heart
chr17 47816239 47818803 vista701
VISTA
Transcript factors that have rs540213245[chr17:47817813]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47817372 47817908 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21768890
chr17 47817372 47817908 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107688339
chr17 47817372 47817908 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108269677
chr17 47817441 47822540 ZNF143 GTRD no Epithelial (MCF-7) 107688340
chr17 47817441 47822540 ZNF143 GTRD no Epithelial (MCF-7) 108269678
chr17 47817441 47822540 ZNF143 GTRD no Epithelial (MCF-7) 108269679
chr17 47817509 47822624 ZNF143 GTRD no Epithelial (MCF-7) 107688341
chr17 47817509 47822624 ZNF143 GTRD no Epithelial (MCF-7) 108269680
chr17 47817509 47822624 ZNF143 GTRD no Epithelial (MCF-7) 108269681
chr17 47817561 47818065 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21768891
chr17 47817561 47818065 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107688342
chr17 47817561 47818065 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108269682
chr17 47817567 47822521 ZNF143 GTRD no Epithelial (MCF-7) 107688343
chr17 47817567 47822521 ZNF143 GTRD no Epithelial (MCF-7) 108269683
chr17 47817567 47822521 ZNF143 GTRD no Epithelial (MCF-7) 108269684
chr17 47817800 47817813 NFKB1 JASPAR yes 15069
chr17 47817800 47817813 NFKB2 JASPAR yes 15070
chr17 47817800 47817813 NFKB1 JASPAR yes 54657515
chr17 47817800 47817813 NFKB2 JASPAR yes 54657516
chr17 47817808 47817813 MYC TRANSFAC yes 15071
chr17 47817808 47817813 MYC TRANSFAC yes 54657517
Genes associated with rs540213245[chr17:47817813], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More