EnhancerDB
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  3. rs540213279[chr7:80402013]
Enhancers that have rs540213279[chr7:80402013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 80387637 80416755 enh40311
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Uterus Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs540213279[chr7:80402013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 80401998 80402016 TP53 JASPAR yes 15935595
chr7 80401999 80402019 TP53 JASPAR yes 15935596
chr7 80402006 80402018 GRHL1 JASPAR yes 15935597
chr7 80402008 80402029 IRF1 JASPAR yes 15935598
chr7 80402011 80402026 FOXP1 JASPAR yes 15935599
chr7 80402013 80402033 RREB1 JASPAR yes 15935600
Genes associated with rs540213279[chr7:80402013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More