EnhancerDB
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  3. rs540222193[chr1:44790221]
Enhancers that have rs540222193[chr1:44790221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 44789685 44797415 enh11821
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs540222193[chr1:44790221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44790220 44790234 TLX1 JASPAR yes 28552259
Genes associated with rs540222193[chr1:44790221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More