EnhancerDB
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  3. rs540236657[chr10:33411565]
Enhancers that have rs540236657[chr10:33411565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33393842 33437095 enh1172
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540236657[chr10:33411565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33411559 33411569 NFIA JASPAR yes 126573216
chr10 33411560 33411569 NFIX JASPAR yes 126573217
chr10 33411561 33411567 NFIC JASPAR yes 126573218
chr10 33411561 33411580 REST JASPAR yes 126573219
Genes associated with rs540236657[chr10:33411565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More