EnhancerDB
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  3. rs540249720[chr3:58331891]
Enhancers that have rs540249720[chr3:58331891]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58318801 58350235 enh7249
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs540249720[chr3:58331891]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58331878 58331899 IRF1 JASPAR yes 2687644
chr3 58331879 58331894 FOXP1 JASPAR yes 2687645
Genes associated with rs540249720[chr3:58331891], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More